I'm sitting here in a 1:1 workshop led by Dr Scott Carrigan from CAPE. (WWW.acape.org) He just pointed us to NetLogo, a wonderful site full of java simulations at NetLogo. This page shows the models that have been contributed by the community and the application is being developed by Notherwestern university.
Check it out: http://ccl.northwestern.edu/netlogo/models/community/
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